Programming for Bioinformatics
Lecturer: Prof. Michael Schroeder (ms at biotec)
Tutors: Janine Roy (janine.roy at biotec)
Slides
- Organisation
- Database
- Python
- Python part 2
- Previous exams: 2005, 2006, 2007, 2008, 2009
- Python + PyMOL (PPT)
Tutorials
- Basic SQL
- Advanced SQL
- Python resources
- PyMOL users manual
- PyMOL Reference Card
- List of basic PyMOL commands
- Useful PyMOL scripts, more PyMOL scripts
Materials for the labs - Summer Semester 2012
- Lab 1 (05.04.2012): Basic SQL (answers)
- Lab 2 (12.04.2012): More SQL on the pet database (answers)
- Lab 3 (19.04.2012): SQL on the SCOP database - part1 (Supplementary material) (answers)
- Lab 4 (26.04.2012): SQL on the SCOP database - part2 (answers)
- Lab 5 (03.05.2012): Introduction to Python (flotillin.fasta) (answers)
- Lab 6 (10.05.2012): More Python (Letter_to_number.txt) (answers)
- Lab7 (24.05.2012):
